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[摘要]
目的 克隆丹参Salvia miltiorrhiza中第14亚群R2R3 MYB转录因子基因SmMYB87的全长序列,并对其进行生物信息学和表达分析。方法 以丹参总RNA为模板,利用同源克隆和cDNA快速扩增(RACE)技术获得SmMYB87 cDNA全长序列。运用生物信息学软件对该基因及其编码蛋白进行结构和理化性质分析,利用qRT-PCR测定SmMYB87在各器官中的表达并构建融合表达载体pTF-486-SmMYB87分析SmMYB87蛋白的亚细胞定位。结果 SmMYB87基因含有2个内含子和1个732 bp的开放阅读框(ORF),编码243个氨基酸。该基因在根、茎、叶和花中均有表达,且4个器官中的表达量没有显著差异。SmMYB87蛋白在细胞核和细胞膜上均有分布。结论 SmMYB87的序列结构和表达分析为进一步研究其在丹参中的生物学作用奠定了理论基础。
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[Abstract]
Objective To clone the R2R3 MYB transcription factor gene SmMYB87 in subgroup 14 from Salvia miltiorrhiza, and analyze the bioinformatics and expression of this gene. Methods Total RNA extracted from S. miltiorrhiza was used as cDNA synthesis template and the full length cDNA sequence was obtained through homology-based cloning and rapid amplification of cDNA ends (RACE) technology. The structure and physicochemical properties of SmMYB87 gene and its coded protein were analyzed with bioinformatics softwares. The expression of SmMYB87 in different organs was determined with qRT-PCR, and a GFP fusion expression vector was constructed to investigate the subcellular laicization of SmMYB87 protein. Results SmMYB87 gene contained two introns and an open reading frame (ORF) of 732 bp, encoding 243 amino acid polypeptides. It expressed in roots, stems, leaves and flowers with similar expression levels and the SmMYB87 protein located in nucleus and cytomembrane. Conclusion The analysis of sequence structure and expression pattern of SmMYB87 will be helpful to study the regulating roles of this gene in S. miltiorrhiza.
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[基金项目]
港澳台科技合作专项项目(2014DFH30010);广东省省级科技计划科技应用型科技研发专项资金项目(2015B020234008);广东省省级科技计划科技基础条件建设领域(2014A030304059